com.google.common.util.concurrent.UncheckedExecutionException: org.eclipse.jgit.api.errors.JGitInternalException: Short read of block.

Issue

I am seeing the following Provision Exception when I try to start a container:

Provision Exception:

        com.google.common.util.concurrent.UncheckedExecutionException: org.eclipse.jgit.api.errors.JGitInternalException: Short read of block.

          at com.google.common.cache.LocalCache$Segment.get(LocalCache.java:2201)

          at com.google.common.cache.LocalCache.get(LocalCache.java:3934)

          at com.google.common.cache.LocalCache.getOrLoad(LocalCache.java:3938)

          at com.google.common.cache.LocalCache$LocalLoadingCache.get(LocalCache.java:4821)

          at io.fabric8.git.internal.GitDataStoreImpl.getVersionFromCacheRW(GitDataStoreImpl.java:503)

          at io.fabric8.git.internal.GitDataStoreImpl.getVersionFromCache(GitDataStoreImpl.java:471)

          at io.fabric8.git.internal.GitDataStoreImpl.getVersion(GitDataStoreImpl.java:635)

          at io.fabric8.internal.ProfileServiceImpl.getVersion(ProfileServiceImpl.java:126)

          at io.fabric8.internal.ContainerImpl.getVersion(ContainerImpl.java:203)

          at io.fabric8.internal.ContainerImpl.getContainerProfile(ContainerImpl.java:762)

          at io.fabric8.internal.ContainerImpl.getOverlayProfile(ContainerImpl.java:306)

          at io.fabric8.agent.DeploymentAgent$11.done(DeploymentAgent.java:697)

          at io.fabric8.agent.service.Agent$2.done(Agent.java:352)

          at io.fabric8.agent.service.Deployer.deploy(Deployer.java:983)

          at io.fabric8.agent.service.Agent.provision(Agent.java:366)

          at io.fabric8.agent.service.Agent.provision(Agent.java:199)

          at io.fabric8.agent.DeploymentAgent.doUpdate(DeploymentAgent.java:727)

          at io.fabric8.agent.DeploymentAgent$4.run(DeploymentAgent.java:283)

          at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)

          at java.util.concurrent.FutureTask.run(FutureTask.java:266)

          at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)

          at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)

          at java.lang.Thread.run(Thread.java:745)

        Caused by: org.eclipse.jgit.api.errors.JGitInternalException: Short read of block.

          at org.eclipse.jgit.api.CheckoutCommand.call(CheckoutCommand.java:320)

          at io.fabric8.git.internal.GitHelpers.checkoutBranch(GitHelpers.java:150)

          at io.fabric8.git.internal.GitDataStoreImpl.checkoutProfileBranch(GitDataStoreImpl.java:1233)

          at io.fabric8.git.internal.GitDataStoreImpl.checkoutRequiredProfileBranch(GitDataStoreImpl.java:1237)

          at io.fabric8.git.internal.GitDataStoreImpl.access$900(GitDataStoreImpl.java:123)

          at io.fabric8.git.internal.GitDataStoreImpl$VersionCacheLoader.populateVersionBuilder(GitDataStoreImpl.java:1794)

          at io.fabric8.git.internal.GitDataStoreImpl$VersionCacheLoader.loadVersion(GitDataStoreImpl.java:1789)

          at io.fabric8.git.internal.GitDataStoreImpl$VersionCacheLoader.access$2900(GitDataStoreImpl.java:1770)

          at io.fabric8.git.internal.GitDataStoreImpl$VersionCacheLoader$1.call(GitDataStoreImpl.java:1778)

          at io.fabric8.git.internal.GitDataStoreImpl$VersionCacheLoader$1.call(GitDataStoreImpl.java:1775)

          at io.fabric8.git.internal.GitDataStoreImpl.executeInternal(GitDataStoreImpl.java:1037)

          at io.fabric8.git.internal.GitDataStoreImpl.access$2200(GitDataStoreImpl.java:123)

          at io.fabric8.git.internal.GitDataStoreImpl$VersionCacheLoader.load(GitDataStoreImpl.java:1782)

          at io.fabric8.git.internal.GitDataStoreImpl$VersionCacheLoader.load(GitDataStoreImpl.java:1770)

          at com.google.common.cache.LocalCache$LoadingValueReference.loadFuture(LocalCache.java:3524)

          at com.google.common.cache.LocalCache$Segment.loadSync(LocalCache.java:2317)

          at com.google.common.cache.LocalCache$Segment.lockedGetOrLoad(LocalCache.java:2280)

          at com.google.common.cache.LocalCache$Segment.get(LocalCache.java:2195)

        ... 22 more

        Caused by: java.io.EOFException: Short read of block.

          at org.eclipse.jgit.util.IO.readFully(IO.java:249)

          at org.eclipse.jgit.dircache.DirCache.readFrom(DirCache.java:456)

          at org.eclipse.jgit.dircache.DirCache.read(DirCache.java:411)

          at org.eclipse.jgit.dircache.DirCache.lock(DirCache.java:227)

          at org.eclipse.jgit.dircache.DirCache.lock(DirCache.java:301)

          at org.eclipse.jgit.dircache.DirCache.lock(DirCache.java:267)

          at org.eclipse.jgit.lib.Repository.lockDirCache(Repository.java:1053)

          at org.eclipse.jgit.api.CheckoutCommand.call(CheckoutCommand.java:257)

        ... 39 more