EAP 6.1 reformats standalone.xml on each deployment

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Issue

Since EAP 6.1, at each hot deployment, the standalone.xml configuration file is modified to remove comments, change indentation, and alter closing tags. These are all cosmetic changes, but we version these files and diffs are reported daily and analyzed. Is there a way to disable the configuration file re-generation?

Environment

Red Hat JBoss Enterprise Application Platform (EAP)
- 6.x
- 7.x

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