Invalid unmanaged deployment breaks working managed deployments in EAP 6 - Red Hat Customer Portal

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Issue

Invalid unmanaged deployment breaks working managed deployments in EAP 6.4
While deploying applications with cli and the deployment directory in standalone mode. There is an unexpected behavior during development which can be reproduced the following way:
- Deploy a working .war with cli (we do so with standard-deployments other applications rely on)
- Stop Server
- Copy a corrupt (e.g. a bad web.xml or jboss-web.xml) .war to the deployment directory of the standalone server
- Start server
- Result is Deployment from the first step has gone.

Environment

Red Hat JBoss Enterprise Application Platform (EAP)
- 6.4. CP4

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